Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYDPLGLSIGTTNLVAAGNGGPPVTRRAVLTLYPHCAPKIGVPSQNPNLIEPGALMSGFVERIGDAVALVSPDGSVHDPDLLLVEALDAMVLTAGADASSSEIA-------IAVPAHWKPGAVHALRNGLRTHVGFVRSGMAPRLVSDAIAALTAVNSELGLPHGSVVGLLDFGGSATYVTLVETKSDSRTSDFQPVSATARYQDFSGSQIDQALLLRVIDQFGY--GDDVDPASTAAVGQLGQLREQCRAAKERLSTD----VATELFAELAGCSSSIEMTREQLEDLIQDPLTGFIYAFDDMLARHNASWADLAAVVTVGGGANIPLVTQRLS--FHTRRPVLTASQPGCAAAMGALLLANRGGERDSRTRTSIGLATAAAAGTSVIELPAGDVMVIDHEALTDRELAWSQTDFPSEAPARFEGDSYNEGGPCWSMRLNAVEPPKGPAWRRIRVSQLLIGVSAVVAMTAIGGVALTLTAIERRPSPLPTPIVPGLAPMPPGSVVPSSRAPTPPPPPSTVAPLPSAAPAPTTVAPAPPPPTQVVTTTTAPPVTTTPRPSPTTTTTTAPPSTTTTTEPPVTTTSTIPTIPTTTTTVKMTTEWLHVPFLPVPIPVPIPQNPGAGEPQNPFGSLGSG |
| 5E84 Chain:A ((120-379)) | ------------------------------------------------------------------------------------EEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDA-----GTIAGLNVMRIINEPTAAAIAYGLDKREGEKNIL-VFDLGGGAFDVSLLTIDNGV----FEVV-ATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRA----VQKLRREVEKAKRALSSQHQARIEIESFYE--GEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPS-RGINPDEAVAYGAAVQA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5E84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -143673 for 1862 contacts (-77.2/contact) +
2D Compatibility (PS) -26820 + (NN) -11177 + (LL) 14160
1D Compatibility (HY) -12000 + (ID) 3300
Total energy: -182810.0 ( -98.18 by residue)
QMean score : 0.365
|
|
|