Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVFSALLLAGVLSALALAVGGAVGMRLTSRVVEQRQRVATEWSGITVSQMLQCIVTLMPLGAAVVDTHRDVVYLNERAKELGLVRDRQLDDQAWRAARQALGGEDVEFDLSPRKRSATGRSGLSVHGHARLLSEEDRRFAVVFVHDQSDYARMEAARRDFVANVSHELKTPVGAMALLAEALLASADDSETVRRFAEKVLIEANRLGDMVAELIELSRLQGAERLPNMTDVDVDTIVSEAISRHKVAADNADIEVRTD-APSNLRVLGDQTLLVTALANLVSNAIAYSPRGSLVSISRRRRGANIEIAVTDRGIGIAPEDQERVFERFFRGDKARSRATGGSGLGLAIVKHVAANHDGTIRVWSKPGTGSTFTLALPALIEAYHDDERPEQAREPELRSNRSQREEELSR |
4BIU Chain:A ((75-293)) | --------------------------------------------------------------------------------------------------------------------------------------------------------RMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKEL----ERIETEAQRLDSMINDLLVMSRNQQKNALVSET-IKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDG--ITITVDDDGPGVSPEDREQIFRPFYRTD----------GLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLP--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92918 for 1483 contacts (-62.7/contact) +
2D Compatibility (PS) -23060 + (NN) -15727 + (LL) 15516
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -133889.0 ( -90.28 by residue)
QMean score : 0.526
|
|
|