Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
4XGQ Chain:C ((2-132))
MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
General information:
TITO was launched using:
RESULT:
Template:
4XGQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65110 for 1025 contacts (-63.5/contact) +
2D Compatibility (PS) -14457 + (NN) -6454 + (LL) 0
1D Compatibility (HY) -16800 + (ID) 6550
Total energy: -109371.0 ( -106.70 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_4XGQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XGQ-query.scw
PDB file :
Tito_Scwrl_4XGQ.pdb
: