Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI |
1NPR Chain:A ((130-248)) | ---------------------------------------------------------------------------------------------------LDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNIL---NQIKRGVKPS-----------------KVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41219 for 634 contacts (-65.0/contact) +
2D Compatibility (PS) -12317 + (NN) -95 + (LL) 7912
1D Compatibility (HY) -12400 + (ID) 2350
Total energy: -60469.0 ( -95.38 by residue)
QMean score : 0.317
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