Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRT--DLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNN--NWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVK--NLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS |
| 1BOH Chain:A ((42-278)) | ----------------------------EARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP-SRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRA----QGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIAT-RKGVTACHIALAAY-LCGKPDVAIYDGSWFEW------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BOH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51829 for 1756 contacts (-29.5/contact) +
2D Compatibility (PS) -24601 + (NN) -13373 + (LL) 3200
1D Compatibility (HY) -14400 + (ID) 3550
Total energy: -104553.0 ( -59.54 by residue)
QMean score : 0.404
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