Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLA-DHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAV---ALHARTAAQRYSGTADWE-------QIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
3B0V Chain:C ((29-327)) | -------------------------VAPMVDRTDRHFRFLVRQ-----VSLGVRLY-TEMTVDQAVLRGN--RERLLAFRPEEHPIALQLAGSDPKSLAEAARI--GEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKA---MGEAVRVPVTVKMRLGL-EGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKR--VDGVMLGRAVYEDPFVLEEADRRVFG--LPRRPSRLEVA---RRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALD------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156398 for 2325 contacts (-67.3/contact) +
2D Compatibility (PS) -30382 + (NN) -6752 + (LL) 3956
1D Compatibility (HY) -16800 + (ID) 4700
Total energy: -211076.0 ( -90.79 by residue)
QMean score : 0.442
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