Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNPQPEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGRDVVAPSLVGGLAGEIRQRAAPVAPVLSAREREVLNRIACGQSIPAIAAELYVAPSTVKTHVQRLYEKLGVSDRAAAVAEAMRQRLLD
4HYE Chain:A ((1-189))
--------MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGRKEYSPELMEM----VMTRPNP----LTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSKLDAGNRTEA-----------
General information:
TITO was launched using:
RESULT:
Template:
4HYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124739 for 1480 contacts (-84.3/contact) +
2D Compatibility (PS) -20471 + (NN) -12823 + (LL) 2136
1D Compatibility (HY) -17600 + (ID) 2650
Total energy: -176147.0 ( -119.02 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_4HYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HYE-query.scw
PDB file :
Tito_Scwrl_4HYE.pdb
: