Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSER-DILRSAADLMLALVDESP
4XRF Chain:A ((35-129))
-----------------------------------QFYILKILDHYGASRATTLAKKMYVKPSAITVMIDRLIDQELVERYHDKDDRRVVIIELTKKGKARVEEAMTARNEHIAKYFSHLELQEREDLLR--------------
General information:
TITO was launched using:
RESULT:
Template:
4XRF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42461 for 570 contacts (-74.5/contact) +
2D Compatibility (PS) -10226 + (NN) -3190 + (LL) 3520
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -59907.0 ( -105.10 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_4XRF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XRF-query.scw
PDB file :
Tito_Scwrl_4XRF.pdb
: