Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQPAFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHLYTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIAPYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTRYRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLECDGVLVSWAVPKNLPDNTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTGEVIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKAS------QWAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQL-RALAEDLADHHVVLDGEAVVLDSSGVPS-FSQMQNRGR----------DTRVEFWAFDLLYLDGRALLGTRYQDRRKLLE-TLANATSLTVPELL---PGDGAQAF-ACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDK-HWNTQEVVIGGWRAGEGGRSSGVGSLLMGIPGPGGLQF--AGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAKGITYVKPALVAEVRYSEW--TPEGR----LRQSSWRGLRPDKKPSEVVRE |
3RR5 Chain:A ((233-549)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRPMLAQNA--ASVKEALIEMGGEAAFEIKYDGARVQVHRDGDRVIIYSRRLENVTRSIPEIVEAVKASLKPSKVIVEGELVAVGENGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDILYVDGESLIDTEFVERRKRLEESVEESEKIKIAEQLVTKKVEEAEAFYKRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTMENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPDSGEFLPVGKVGSGFTDEDLVEFTKMLKPLIL-----------REEGKFVEIEPKVVIEVTYQEIQKSPKYRSGFALRFPRYVALREDKSPEE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105196 for 2117 contacts (-49.7/contact) +
2D Compatibility (PS) -31233 + (NN) -16242 + (LL) 27764
1D Compatibility (HY) -21600 + (ID) 5200
Total energy: -151707.0 ( -71.66 by residue)
QMean score : 0.434
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