Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLGF--STAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL |
| 2YV1 Chain:A ((8-292)) | -----ILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHG---------VPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVG--VKIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIE-KMKKPVIGYIAGQ-------------------GTAESKMKALEEAGAYVAKNISDIPKLLAGIL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207534 for 2434 contacts (-85.3/contact) +
2D Compatibility (PS) -30646 + (NN) -23065 + (LL) 1700
1D Compatibility (HY) -23200 + (ID) 6850
Total energy: -289595.0 ( -118.98 by residue)
QMean score : 0.719
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