Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
3LNW Chain:A ((22-64))
--------------------------FVQTASKFSSQIWVEKDNK-KVNAKSIMGIMSLGVSQGNVVKLS---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3LNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19189 for 240 contacts (-80.0/contact) +
2D Compatibility (PS) -4583 + (NN) -1791 + (LL) 6992
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -22471.0 ( -93.63 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_3LNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LNW-query.scw
PDB file :
Tito_Scwrl_3LNW.pdb
: