Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGAAPTNGAPLSYPSICEGVH-WGHLVGGHQPAY
3VGI Chain:A ((119-140))
-------SNWVHGYPEIFYGNKPWNANYA------
General information:
TITO was launched using:
RESULT:
Template:
3VGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5752 for 65 contacts (-88.5/contact) +
2D Compatibility (PS) -2281 + (NN) -1237 + (LL) 244
1D Compatibility (HY) -800 + (ID) 250
Total energy: -10076.0 ( -155.02 by residue)
QMean score : 0.112
(partial model without unconserved sides chains):
PDB file :
Tito_3VGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VGI-query.scw
PDB file :
Tito_Scwrl_3VGI.pdb
: