Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVHLTRIYTRTGDDGTTGLSDMSRVAKTDARLVAYADCDEANAAIGAALALGHPDTQI-TDVLRQIQNDLFDAGADLSTPIVENPKHPPLRIAQSYIDRLEGWCDAYNAGLPALKSFVLPGGSPLSALLHVARTVVRRAERSAWAAVDAHPEGVSVLPAKYLNRLSDLLFILSRVAN---PDGDVLWRPGGDRTAS
3CI3 Chain:A ((7-191))
-----VKIYTKNGDKGQTRIIGKQILYKNDPRVAAYGEVDELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLATP-ADDERHSFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLMREEQINQDVLI--FINRLSDYFFAAARYANYLEQQPDMLYRNSKD----
General information:
TITO was launched using:
RESULT:
Template:
3CI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64141 for 1330 contacts (-48.2/contact) +
2D Compatibility (PS) -19854 + (NN) -15039 + (LL) 1444
1D Compatibility (HY) -10400 + (ID) 3500
Total energy: -111490.0 ( -83.83 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_3CI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CI3-query.scw
PDB file :
Tito_Scwrl_3CI3.pdb
: