Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPN-LHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPE--AVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAA--QGDFDKVVVNRRLESACAELVSLLVGTAPGSP
1GKY Chain:A ((2-183))---------------------RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYY--GSTVASVKQVSKSGKTCILDIDMQGVKSV-KAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKELKDFIF-------


General information:
TITO was launched using:
RESULT:

Template: 1GKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98173 for 1290 contacts (-76.1/contact) +
2D Compatibility (PS) -20114 + (NN) -10605 + (LL) -16
1D Compatibility (HY) -14400 + (ID) 3800
Total energy: -147108.0 ( -114.04 by residue)
QMean score : 0.641

(partial model without unconserved sides chains):
PDB file : Tito_1GKY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GKY-query.scw
PDB file : Tito_Scwrl_1GKY.pdb: