Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMPDYHALIVGAGFSGIGAAIKLDRAGFSDYLVVEAGDGVGGTWHWNTYPGIAVDIPSFSYQFSFE----QSRHWSRTYAPGHELKAYAEHCVDKYGIRSRIRLNTKVLAAEFDDEHSLWRVQTDPGGEITARFLISACGILTVPKLPDIDGVDSFEGVTMHTARWDHTQDLTGKRVGIIGTGASAVQVIPEMAPIVSHLTVFQRTPIWCFPKFDVPLPTAVRWAMRIPGGKAVHRLLSQA----FVEATFPIAA---------------------HYFAVFPLAKHMESAG-------RRYLRQQVHDPVVREQLTPRYAVGCKRPGFHNTYLSTFNRDNVRLVT---EPIDKITPTAVATTDGASHEIDVLVLATGFKVLDTDSIPTYAVTGTGGASLSRFWDEHRLQAYEGVSVPGYPNFFTVFGPYGYVGSSYFALIETQAHHIIRCLKRARRTGATRIEVTEEANARYFAEVMRRRHRQVFWQDSC-RLANSYYFDKNGDVPLRPTTTVEAYWRSRRFDLGDYRISS |
| 4RG4 Chain:A ((19-513)) | ------AVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGN-YRRIEIRGRDGLHINDHWD-GQPTSYLGVSTANFPNWFMVLGPNGPF-TNLPPSIETQVEWISDTIGYAERNGVRAIEPTPEAEAE--------------WTETCTEIANATLFTK------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280092 for 3537 contacts (-79.2/contact) +
2D Compatibility (PS) -46872 + (NN) -15567 + (LL) 3392
1D Compatibility (HY) -24400 + (ID) 8200
Total energy: -371739.0 ( -105.10 by residue)
QMean score : 0.467
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