Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLS-LKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQET-GDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVTKPPVS
2BYO Chain:A ((20-207))------------------------------------SDPALLAEIRQSLDATKGLTSVHVAVRTTGKVDSLLGITSADVDVRANPLAAKGVCTYN-DE--QGVPFRVQGDNISVKLF-DDWSNLGSISE-LSTSRV-----GVTQLLSGVTNLQAQGTEVIDGISTTKITGTIPASSVKMLDPG--AKSARPATVWIAQDGS-HHLVRASIDLG-SGSIQLTQSKWNEPVNVD-----


General information:
TITO was launched using:
RESULT:

Template: 2BYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50749 for 1324 contacts (-38.3/contact) +
2D Compatibility (PS) -19382 + (NN) -4944 + (LL) 2104
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -85321.0 ( -64.44 by residue)
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_2BYO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BYO-query.scw
PDB file : Tito_Scwrl_2BYO.pdb: