Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLS-LKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQET-GDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVTKPPVS |
2BYO Chain:A ((20-207)) | ------------------------------------SDPALLAEIRQSLDATKGLTSVHVAVRTTGKVDSLLGITSADVDVRANPLAAKGVCTYN-DE--QGVPFRVQGDNISVKLF-DDWSNLGSISE-LSTSRV-----GVTQLLSGVTNLQAQGTEVIDGISTTKITGTIPASSVKMLDPG--AKSARPATVWIAQDGS-HHLVRASIDLG-SGSIQLTQSKWNEPVNVD----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50749 for 1324 contacts (-38.3/contact) +
2D Compatibility (PS) -19382 + (NN) -4944 + (LL) 2104
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -85321.0 ( -64.44 by residue)
QMean score : 0.322
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