Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSVTRAGEIGYLPQDPKVGDLDVLARDRVLSARGLDVLLTDLE---KQQALMAEVADEDERDRAIRRYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLRTLSGGQRRRVELARILFAASESGAGNSTTLLLDEPTNHLDA----DSLGWLRDFLRLHTGGLVVISHN---VDLVADVVNKVWFLDAVRGQVDV---YNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNMLRRADRMMAALDEERVADKVARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDRGSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRIGYFAQEHDTLDNDATVWENVRHAAPDAGEQ-DLRGLLGAFMFTGPQLE--------------QPAGTLSGGEKTRLALAGLVASTANVLLLDEPTNNLDPASREQVLDALRSY----RGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIELA |
| 3J16 Chain:B ((101-541)) | --------------------------RPGQVLGLVGTNGIGKSTALKILAGKQKP---------NLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYV-------DNIPRAIKGPVQKVGELLKLRMEKSPEDVKRYIKILQL-ENVLKRDIEKLSGGELQR-------FAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLA-PTKYVICVEHDLSVLDYLSDFVCIIYGVPSVYGVVTLPASVREGINIFLDGHIPAENLRFRTEALQFRIADA--------------------------------TEDLQNDSASR-AFSYPS-----------LKKTQGDF-VLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKL---------------NVSMKPQKIAPKFPGTVRQLFFKKIRGQFL--NPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51708 for 3101 contacts (-16.7/contact) +
2D Compatibility (PS) -43488 + (NN) -12711 + (LL) 10576
1D Compatibility (HY) -28000 + (ID) 6300
Total energy: -131631.0 ( -42.45 by residue)
QMean score : 0.231
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