Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRNRRGSPARPAARFVRPAIPSALSVALLVCTPGLATADPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSVSYLSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSSEGGQGAPPFRMWDPGSGPAGGRAWDGLWDPTLPMIPSANIPGDPIAVVNQVLGISATSAQVTANMGRKFLEQLGILQPTDTGITNAPAGSAQGRIPRVYGRQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLPHYSGSQYNLGRKIPSSQMRRGDVIFYGPNGSQHVTIYLGNGQMLEAPDVGLKVRVAPVRTAGMTPYVVRYIEY |
| 3I86 Chain:A ((6-141)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYGRQAIEYVIKRMGSQMGVPYSWGGGSLDGPSKGVGDGANITGFDCSGLMRYGFAGVGVLIPRFSGDQYNAGRHIPQDQARRGDLIFYGPGGSQHVTMYLGNGQMLEASGSAGKVTVSPVRKPGMTPFLTRIIEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79452 for 1110 contacts (-71.6/contact) +
2D Compatibility (PS) -14763 + (NN) -8391 + (LL) 23184
1D Compatibility (HY) -13200 + (ID) 4600
Total energy: -97222.0 ( -87.59 by residue)
QMean score : 0.521
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