Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKV---AVTHRGSGAPKGLFG-----VECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
3RSH Chain:A ((16-250))
------------------LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK---DEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYM--
General information:
TITO was launched using:
RESULT:
Template:
3RSH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118572 for 1844 contacts (-64.3/contact) +
2D Compatibility (PS) -24240 + (NN) -2899 + (LL) 1188
1D Compatibility (HY) -19600 + (ID) 5100
Total energy: -169223.0 ( -91.77 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3RSH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RSH-query.scw
PDB file :
Tito_Scwrl_3RSH.pdb
: