Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEPGDSVTVVQIDGATAVVFKDV
3CP0 Chain:A ((20-81))
---------------------------------------------------------------------------------SPRALVGHRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFAEGEIVSVIDIQGTTAIVWKE-
General information:
TITO was launched using:
RESULT:
Template:
3CP0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27412 for 420 contacts (-65.3/contact) +
2D Compatibility (PS) -6995 + (NN) -598 + (LL) 8580
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -33325.0 ( -79.35 by residue)
QMean score : 0.762
(partial model without unconserved sides chains):
PDB file :
Tito_3CP0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CP0-query.scw
PDB file :
Tito_Scwrl_3CP0.pdb
: