Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMPGYDDPVREPALI |
4HUQ Chain:S ((42-72)) | -------------------------------------------------------------------------------------TFLIVALIAKWFGPWWGMLTAAVVDVIGTLM---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9379 for 148 contacts (-63.4/contact) +
2D Compatibility (PS) -2935 + (NN) 1278 + (LL) 17924
1D Compatibility (HY) -2400 + (ID) 250
Total energy: 4238.0 ( 28.64 by residue)
QMean score : 0.048
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