Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQAATRPTNDAGQDGGNNSDILVVARQQVLQRGEGLNQDQVLAVLQLPDDRLEELLALAHEVRMRWCGPEVEVEGIISLKTGGCPEDCHFCSQSGLFA--SPVRSAWLDIPSLVEAAKQTAKSGATEFCIVAAVRGPDERLMAQVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSFFANVVTTHT-WEERWQTLSMVRDAGMEVCCGGILGM-GETLQQRAEFAAELAELGPDEVPLNFLNPRPGTPFADLEVMPVGDALKAVAAFRLALPRTMLR--------FAGGREITLGDLGAKRGILGGINAVIVGNYLTTLGRPAEADLELLDELQMPLKALNASL |
5FF4 Chain:A ((43-293)) | -----------------------------------------------------EALFKLADEIRRKYVGDEVHIRAIIEF-SNVCRKNCLYC---GLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQS---GEDPYYMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITL-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5FF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146571 for 1863 contacts (-78.7/contact) +
2D Compatibility (PS) -26961 + (NN) -20880 + (LL) 6544
1D Compatibility (HY) -16000 + (ID) 3450
Total energy: -207318.0 ( -111.28 by residue)
QMean score : 0.493
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