Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSGHPVTLDDLPLRADLRGKAPYGAPQLAVPVRLNTNENPHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGIQLGVENIWAANGSNEILQQLLQAFGGPGRSAIGFVPSYSMHPIISDGTHTEWIEASRANDFGL-DVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPGIAIVDEAYGEFSSQPSAVSLVEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSSVTQAAARAALRHSDDTLSSVAALIAERERVTTSLNDMGFRVIPSDANFVLFGEFADAPAAWRRYLEAGILIRDVGIPGY---LRATTGLAEENDAFLRASARIATDLVPVTRSPVGAP |
| 1UU2 Chain:A ((24-329)) | -----------------------------------LALNENPFPFPEDLVDEVFRRLNSDALRI--YYDSPDEELIEKILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFD----RSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVG-------EGDVVFIPNPNNPTGHVFEREEIERILKTGAFVAL-DEAYYEFHGE-SYVDFLKKYEN-LAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFV----FVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILR-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151989 for 2458 contacts (-61.8/contact) +
2D Compatibility (PS) -33436 + (NN) -21078 + (LL) 3860
1D Compatibility (HY) -26400 + (ID) 5250
Total energy: -234293.0 ( -95.32 by residue)
QMean score : 0.394
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