Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTQTAKASRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSGVPSTKGAL
4MU3 Chain:A ((7-192))
--------SARIGEVKRETKQTNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIP----TQRVGT---YDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRG---------
General information:
TITO was launched using:
RESULT:
Template:
4MU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126980 for 1586 contacts (-80.1/contact) +
2D Compatibility (PS) -19697 + (NN) -4922 + (LL) 1268
1D Compatibility (HY) -10400 + (ID) 4550
Total energy: -165281.0 ( -104.21 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_4MU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MU3-query.scw
PDB file :
Tito_Scwrl_4MU3.pdb
: