Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALREPGIGVIAEVKRASPSAGALATIADP---AKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTAGTHPSCPKPAR |
| 1LBF Chain:A ((47-238)) | -----------------------------------------------------IIAEYKRKSPSG--LDVERDPIEYSKFMERYAVG----LSILTEEKYFNGSYETLRKIASSVSIPILMKDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLIEINDENDLDIALRIGARFIGINSRDLETLEINKENQRKLISMIPSNVVKVAESGISERNEIEELRKLGVNAFLIGSSLMRN------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1LBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93856 for 1517 contacts (-61.9/contact) +
2D Compatibility (PS) -20656 + (NN) -8082 + (LL) 4900
1D Compatibility (HY) -18400 + (ID) 3800
Total energy: -139894.0 ( -92.22 by residue)
QMean score : 0.515
|
|
|