Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATT-NPSAAALAAMTAVQARLL-DLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLAT-LGVALVAVGIGLRLVFG-------EMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGRRTVTARG--GVIRLERLSVRGRDGRAPY--DLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVL---LGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR |
| 4Q4J Chain:A ((138-538)) | ---------------------------------------------------------------------------------------------------------------------PLLFVGGIVMAVSINV------KLSSVLIFLIP--PIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRRE--------EYENENFRKANESLRRSIISAFSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEEADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLSIARALVKKPKVLILDDSTCSVDPITEKRILDGL-KRYTKGSTTFIITQKIPTALLADKIL--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -207282 for 2727 contacts (-76.0/contact) +
2D Compatibility (PS) -42283 + (NN) -23981 + (LL) 10536
1D Compatibility (HY) -33600 + (ID) 5100
Total energy: -301710.0 ( -110.64 by residue)
QMean score : 0.440
|
|
|