Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIDPDQIRAEIDALLASLPDPADAENGPSLAELEGIARRLSEAHEVLLAALESAEKG
1P9I Chain:A ((15-30))
----NKQLKAKVEELLAKVG--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1P9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1433 for 54 contacts (-26.5/contact) +
2D Compatibility (PS) -1993 + (NN) -2588 + (LL) 2916
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -5348.0 ( -99.04 by residue)
QMean score : 0.764
(partial model without unconserved sides chains):
PDB file :
Tito_1P9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9I-query.scw
PDB file :
Tito_Scwrl_1P9I.pdb
: