Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTSHGFSRAAVVGAGLMGRRIAGVLASAGLDVAITDTNAEILH----------AAAVEAARVAGAGR----GSVAAAADLAAAIPDADLVIEAVVENLAVKQELFERL-ATLAPDAVLATNTSVLPIGAVTERVEDGSRVIGTHFWNPPDLIPVVEVVPSARTAPDTADRVVALLTQVGKLPVRVGRDVPGFIGNRLQHALWREAIALVAEGVCDPKTVDLVVRNTIGLRLATLGPLENADYIGLDLTLAIHDAVIPSLNHDPH-PSPLLRELVAAGQLGARTGHGFLDWPAGAREATTARLAQHIAAQLQANEKGRGT |
| 4R1N Chain:A ((1-280)) | ------MKKVFVLGAGTMGAGIVQAFAAKGCEVIVRDIKEEFVDRGIATITKSLSKLVAKEKITEADKEEILSRISGTTDMKLA-ADCDLVVEAAIENMKIKKEIFAELDGICKPETILASNTSSLSITEVASATKRADKVIGMHFFNPAPVMKLVEVIRGAATSQETFDAVKEMSESIGKTPVEVA-EAPGFVVNRILIPMINEATFILQEGVAKEEDIDAAMK--LGAN-HPMGPLALGDLIGLDVCLAIMDVLYNETGDTKYRASSLLRKYVRAGWLGRKTGKGFYDY----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149195 for 2145 contacts (-69.6/contact) +
2D Compatibility (PS) -28664 + (NN) -14111 + (LL) 2836
1D Compatibility (HY) -23600 + (ID) 4750
Total energy: -217484.0 ( -101.39 by residue)
QMean score : 0.436
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