Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDM-QLTRDGVAACPEMALILEEDDAD
4DHV Chain:B ((2-65))
WKVSVDQDTCIGCAICA-LCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEE----
General information:
TITO was launched using:
RESULT:
Template:
4DHV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37939 for 425 contacts (-89.3/contact) +
2D Compatibility (PS) -6403 + (NN) -2802 + (LL) 60
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -52834.0 ( -124.32 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_4DHV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DHV-query.scw
PDB file :
Tito_Scwrl_4DHV.pdb
: