Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDVSRKIRAWGRRLMIGTAAAVVLPGLVGLAGGAATAGAFSRPGLPVEYLQVPSPSMGRDIKVQFQSGGNNSPAVYLLDGLRAQDDYNGWDINTPAFEWYYQSGLSIVMPVGGQSSFYSDWYSPACGKAGCQTYKWETFLTSELPQWLSANRAVKPTGSAAIGLSMAGSSAMILAAYHPQQFIYAGSLSALLDPSQGMGPSLIGLAMGDAGGYKAADMWGPSSDPAWERNDPTQQIPKLVANNTRLWVYCGNGTPNELGGANIPAEFLENFVRSSNLKFQDAYNAAGGHNAVFNFPPNGTHSWEYWGAQLNAMKGDLQSSLGAG |
4QE3 Chain:A ((8-282)) | ---------------------------------------------LPVEYLQVPSASMGRDIKVQFQGGGPH--AVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGN----------IPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTQSWPYWNEQLVAMKADIQHVL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121653 for 2364 contacts (-51.5/contact) +
2D Compatibility (PS) -28794 + (NN) -21133 + (LL) 2104
1D Compatibility (HY) -30400 + (ID) 9600
Total energy: -209476.0 ( -88.61 by residue)
QMean score : 0.782
|
|
|