Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSGVVSRTNIEIDDELVAAAQRMY--RLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
2K5J Chain:A ((7-62))
---IDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIW-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2K5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7273 for 208 contacts (-35.0/contact) +
2D Compatibility (PS) -6040 + (NN) -5103 + (LL) 976
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -18840.0 ( -90.58 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_2K5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5J-query.scw
PDB file :
Tito_Scwrl_2K5J.pdb
: