Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRPRTDAIHHHVVVNAPIERAFAVFTTR--FGDFKPREHNLLAIPITETVFECHAGGHIYDRGV--DGS-VCKWARVLVYEPPSRVLFTWDIGPTWRPETDLAKTSEVEVRFTAQSAETTRVDLEHRHLDRHGPGWESVADGVDSEAGWPLYLRRYTDLLCIQVQP
3ELI Chain:A ((2-145))
------ADLRLEREFAVAPEALFAWVSDGAKLLQWWGP-EGLH-VPADQHDLDFTRLGPWFSVMVNGEGQRYKVSGQVTHVKPPQSVGFTWGWHDDDD---RRGAESHVMFIVEPC---GARLILDHRELGDD-----EMSLRH--EEGWTSSLRKLAAELAL----
General information:
TITO was launched using:
RESULT:
Template:
3ELI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36386 for 916 contacts (-39.7/contact) +
2D Compatibility (PS) -14215 + (NN) -1809 + (LL) 1084
1D Compatibility (HY) 2400 + (ID) 800
Total energy: -49726.0 ( -54.29 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_3ELI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ELI-query.scw
PDB file :
Tito_Scwrl_3ELI.pdb
: