Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSATGPFSIGERVQLTDAKGRRYTMSLTPGAEFHTHRGSIAHDAVIGLEQGSVVKSSNGALFLVLRPLLVDYVM-SMPRGPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRAWETLQRGWNVVGLAVRPQHSMRGHTAFLVATRRLAPGAVAPAPLGRKREGRDG
2YVL Chain:A ((4-246))------FKEGEYV-LIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKPEGVKI---NG--FEVYRPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGAL-LAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKF--NLGKNVKFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESI--ENYFGNLEVVEILHRHYKTISERFRPEDQMVAHTAYLVFGRKL-------------------


General information:
TITO was launched using:
RESULT:

Template: 2YVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170262 for 1909 contacts (-89.2/contact) +
2D Compatibility (PS) -26183 + (NN) -13816 + (LL) 644
1D Compatibility (HY) -21200 + (ID) 3800
Total energy: -234617.0 ( -122.90 by residue)
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_2YVL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YVL-query.scw
PDB file : Tito_Scwrl_2YVL.pdb: