Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQSLAVKTFEDLFAELGDRARTRPADSTTVAALDGGVHALGKKLLEEAGEVWLAAEHESNDALAEEISQLLYWTQVLMISRGLSLDDVYRKL
1VMG Chain:A ((36-91))
------------------------------------GIYATFTWLVEEVGELAEALLSNNLDSIQEELADVIAWTVSIANLEGIDIEEALKK-
General information:
TITO was launched using:
RESULT:
Template:
1VMG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5986 for 306 contacts (-19.6/contact) +
2D Compatibility (PS) -6369 + (NN) -6089 + (LL) 2776
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -18418.0 ( -60.19 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_1VMG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VMG-query.scw
PDB file :
Tito_Scwrl_1VMG.pdb
: