Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHAKVGDYLVVKGTTTERHDQHAEIIEVRSA--------DGSPPYVVRWLVNGHETTVYPGSDAVVVTATEHAEAEKRAAARAGHAAT
4P5N Chain:A ((12-69))
-NINVGDTVYTP---YRGGKHEGQVADIVTTKEEAAEKGVKNPPKVLFTDQNNKDVAHNPGT--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4P5N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15585 for 279 contacts (-55.9/contact) +
2D Compatibility (PS) -5701 + (NN) -3845 + (LL) 2728
1D Compatibility (HY) 800 + (ID) 450
Total energy: -22053.0 ( -79.04 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_4P5N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P5N-query.scw
PDB file :
Tito_Scwrl_4P5N.pdb
: