Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGRFRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG |
2YO3 Chain:A ((70-199)) | -------------------------------------------------------------------TGSTKYFKTNTDGADANAQGADSVAIGSGSIAAAENSVALGTNSVAD----EANTVSVG------SSTQQRRITNVAAGVNNTDAVNVAQLKAS-------EAGSVRYETNADGSVNYSVLNLGDGSGGTTRIGNVSAAVNDTDAVN-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31785 for 695 contacts (45.7/contact) +
2D Compatibility (PS) -14447 + (NN) -11943 + (LL) -3004
1D Compatibility (HY) -1600 + (ID) 1700
Total energy: -909.0 ( -1.31 by residue)
QMean score : -0.219
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