Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQK-GRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL
3MLB Chain:A ((9-189))
IGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPY-----------PITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY--------------------
General information:
TITO was launched using:
RESULT:
Template:
3MLB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123719 for 1333 contacts (-92.8/contact) +
2D Compatibility (PS) -19402 + (NN) -8185 + (LL) 1324
1D Compatibility (HY) -15200 + (ID) 3700
Total energy: -168882.0 ( -126.69 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3MLB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MLB-query.scw
PDB file :
Tito_Scwrl_3MLB.pdb
: