Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNWDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAKPPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYL--RPDELHLGFNFRLA-------------RTEFDAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSRYGGGEIGLRR--AKAMAVVMLALPGVVFLYNGQELGLPDVDLPDEVLQD----------PTWERSGRTE----------RGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRERNEFDG----DVDWLAAPDDALIFRRHGGG----LVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV |
4GIN Chain:A ((30-551)) | ---------------------------GAPWWKSAVFYQVYPRSFKDTNGDGIGDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVINHSSDQHEWFKSSRAS-KDNPYRDYYFWRDGK--DGH-EPNNYPSFFGGSAW----EKDPVTGQYYLHYFGRQQPDLNWDTPKLREELYAMLRFWLDKGVSGMRFDTVATYSKTPGF---PDLTPEQMKNF-AEAYTQGPNLHRYLQEMHEKVFDHYDAVTAGEIFGAPLNQVPLFIDSRRKELDMAFTFDLICYDRALDRWHTIPRTLADFRQTIDKV----DAIAGEYGWNTFFLGNHDNPRAVSHFGDDRPQWREASAKALATVTLTQRGTPFIFQGDELGM--TNYPFKTLQDFDDIEVKGFFQDYVETGKATAEELLTNVALTSRDNARTPFQWDDSANA-GFTTGK-PWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTGSYRDID--PSNADVYAYTRSQDGETYLVVVNFKAEPRSFTLPDGMHI-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -156736 for 3940 contacts (-39.8/contact) +
2D Compatibility (PS) -53049 + (NN) -48516 + (LL) 2056
1D Compatibility (HY) -33600 + (ID) 9600
Total energy: -299445.0 ( -76.00 by residue)
QMean score : 0.539
|
|
|