Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRDLAPALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVGKPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVGQPLQDHLAAVLHRQR
4YMY Chain:A ((26-173))------PFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWKLESGAPALAESGYFRPRPDGSIEVVIACSTGLVEVQKGTYNVDEQSIKL----KSD----LVGNASKVKEISREFELVDGKLSYVVRLSTTTNPLQPALKAILDK--


General information:
TITO was launched using:
RESULT:

Template: 4YMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57770 for 1082 contacts (-53.4/contact) +
2D Compatibility (PS) -15914 + (NN) -9179 + (LL) 960
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -96853.0 ( -89.51 by residue)
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_4YMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMY-query.scw
PDB file : Tito_Scwrl_4YMY.pdb: