Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
1DG8 Chain:A ((1-159))
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
General information:
TITO was launched using:
RESULT:
Template:
1DG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98262 for 1191 contacts (-82.5/contact) +
2D Compatibility (PS) -16981 + (NN) -6906 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 7950
Total energy: -151299.0 ( -127.04 by residue)
QMean score : 0.875
(partial model without unconserved sides chains):
PDB file :
Tito_1DG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DG8-query.scw
PDB file :
Tito_Scwrl_1DG8.pdb
: