Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF
3GWK Chain:C ((3-98))
MSQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIASQISG-
General information:
TITO was launched using:
RESULT:
Template:
3GWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19031 for 530 contacts (-35.9/contact) +
2D Compatibility (PS) -10929 + (NN) -7425 + (LL) 132
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -40103.0 ( -75.67 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3GWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWK-query.scw
PDB file :
Tito_Scwrl_3GWK.pdb
: