Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGLDAGGYVPKQVIAFLNNDHNRAQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELMGTEDDVAAVRTGLAEFWKEQTCHQPSLQSL
2XOE Chain:A ((2-112))
-------LVAYDSMTGNVKRFIHKLNMPAVQIG--EDLVIDEDFILITYTTGFGN----------VPERVLEFL--ERNNEKLKGVSASGNRNWGDMFGASADKISAKYEVPIVSKFELSGTNNDV--------EYFKER----------
General information:
TITO was launched using:
RESULT:
Template:
2XOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97712 for 877 contacts (-111.4/contact) +
2D Compatibility (PS) -11720 + (NN) -3271 + (LL) 1512
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -123591.0 ( -140.92 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_2XOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XOE-query.scw
PDB file :
Tito_Scwrl_2XOE.pdb
: