Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKDGAIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSPYDLSRGRIVYRYK
1D7Q Chain:A ((36-94))
------------QVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK-VWINTSDIILVGLRDYQDNKADVILKY-
General information:
TITO was launched using:
RESULT:
Template:
1D7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48633 for 374 contacts (-130.0/contact) +
2D Compatibility (PS) -6394 + (NN) -1251 + (LL) 964
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -61764.0 ( -165.14 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1D7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D7Q-query.scw
PDB file :
Tito_Scwrl_1D7Q.pdb
: