Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVIVDRDRCEGNAVCLGIAPDIFDLDDEDYAVVKTDPIPVDQEDLAEQAIAECPRAALSRGE
1VJW Chain:A ((1-57))
MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQ---PETDLPCAKDAADSCPTGAIS---
General information:
TITO was launched using:
RESULT:
Template:
1VJW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34172 for 411 contacts (-83.1/contact) +
2D Compatibility (PS) -6345 + (NN) -6464 + (LL) 20
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -51311.0 ( -124.84 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1VJW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VJW-query.scw
PDB file :
Tito_Scwrl_1VJW.pdb
: