Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVRVPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLASGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDDAKAETILDEVLAAAS
4L5G Chain:A ((4-157))
--FRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPEEVPVILDLLKNGRMPLPKQWAARHRKTSEILADGNPYRIAQMAGQLRAWEVERGLPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEE------
General information:
TITO was launched using:
RESULT:
Template:
4L5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14022 for 1024 contacts (-13.7/contact) +
2D Compatibility (PS) -16923 + (NN) -8153 + (LL) 1096
1D Compatibility (HY) -400 + (ID) 1350
Total energy: -39752.0 ( -38.82 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_4L5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L5G-query.scw
PDB file :
Tito_Scwrl_4L5G.pdb
: