Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVYTGSDAGDHASAPQPSGSGSVPASVNVPGLVVAAVWAVGLVAGLVALTIGHLAVAAAALVVAVMAPWCRVAYIAHGQHRVCGETLRGTPAGETASFPTGWRGLRFSTR
3WGU Chain:G ((18-48))
-----------------------------------------------PFYYDYETVRNGGLIFAALAFIVGLIIILSK--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5815 for 110 contacts (-52.9/contact) +
2D Compatibility (PS) -3472 + (NN) -2203 + (LL) 3352
1D Compatibility (HY) -4000 + (ID) 250
Total energy: -12388.0 ( -112.62 by residue)
QMean score : -0.222
(partial model without unconserved sides chains):
PDB file :
Tito_3WGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WGU-query.scw
PDB file :
Tito_Scwrl_3WGU.pdb
: