Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADG-GPASGRG---FHVNYSAPP---------------LNAIQAGPSVQFARIMRD----QLQASGIPKANYIGQD----------GLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQAR |
| 3NE8 Chain:A ((3-223)) | ------------------------ASFRVVLDPGHGGID------------GGARGV--------TGILEKDVTLAFARALRDELQK-GSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDEASDAIAKSLAESENKVDLLDGLPKE------DILLDLTRRETHAFSINFANNVVSNLSKSHINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQMAASIAYSIRQF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30674 for 1406 contacts (-21.8/contact) +
2D Compatibility (PS) -20450 + (NN) -13219 + (LL) 3792
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -73801.0 ( -52.49 by residue)
QMean score : 0.348
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