Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQTTPAVRTFQDLILALQNYWAEQGCVVLQPYDME---------VGAGTFHTATFLRA-IGPETW-NAAYVQPSRRPTD----GRYGENPNRLQHYYQFQVVLKPNPE----------NFQELYLGSLKAIGIDPLVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQ--Q--VG-------G-IECYPVTGEITYGLERLAMYLQGVDSVYDLVWTDGPFGKVTYGDVFHQNEVEQSTFNFEHANVPKLFELFDFYESEANRLIALELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARAVAQSYLQARARLGFPMATPELRDEVLAKLKEAE |
| 3WQY Chain:A ((57-270)) | -----KKPFELDEMREYYLNFFERRGHGRIERYPVVARWRTDIYLTIASIADFQPFVTSGVAPPPANPLTISQPCIRLDDLDSVGRTG------RHLTLFEMMAHHAFNYPGKEIYWKNETVAYCTELLNELGVKK--EDIVYKEEPWAG--GGNAGPCLEAIVGGLEVATLVFMNLEEHPEGDIEIKGARYRKMDNYIVDTGYGLERFVWASKGTPTVYDAIFPEVVDTIIDNSNVSFNREDERVRRIVAESSKLAGIMGELRGERLNQLRKSVADTVGVSVEELEGIVVPLEKVYSLADHTRCILFMLGDGLVPSNAGAGYLARLMIRRSLRLAEELELGLDLYDLVEMH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82665 for 1297 contacts (-63.7/contact) +
2D Compatibility (PS) -19206 + (NN) -4314 + (LL) 764
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -112471.0 ( -86.72 by residue)
QMean score : 0.311
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