Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGT---RSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHH---VWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTGQVAYARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL
1GYG Chain:A ((92-165))-----------------------------------------------------------------------------------------------------------------------------------------------------------------DTGESQIRKFSALARYEWQR--GNYKQATFY---------------------LGEAMHYFGDIDTPYHPANVTAVDSAGHVKFETFAEERKEQYKINTVGCKTNEDFYADILKNKDFNAWSKEYARGFAKTGKSIYYSHASMSHSWDDWDYAAKVTLANSQKGTAGYIYRFLH


General information:
TITO was launched using:
RESULT:

Template: 1GYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7455 for 332 contacts (22.5/contact) +
2D Compatibility (PS) -7296 + (NN) -1130 + (LL) 11772
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: 7251.0 ( 21.84 by residue)
QMean score : 0.101

(partial model without unconserved sides chains):
PDB file : Tito_1GYG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GYG-query.scw
PDB file : Tito_Scwrl_1GYG.pdb: