Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVAALPAVDDRPPPPAPVRSQAAAPAYEAEPPVA--------ELDREQAIQFMQMLRDEGDPRSPPLGGLQPRQGATAQELADPKQYQAFEERQTRELVQAYTSGVQQIPEIRARIEAAEQGGERSAEEIDEARAALGQLEMMRDKLQRESPQLLPGDSAPTSPAAP
3NAH Chain:A ((4-81))-------------------------------------RPSGTYAGLPIADYGDAPPLSTKTMFWRTSPEKLPPGAWEPAYLGSKDERVDGPSLQQVMRDQLKPYSEPRGLLPPQEILDAVCDAIENRLENTLEPQKPWTFKKACESLDKNTSSGYPYHKQKSKDWTGSAFIGDLGDQATHANNMYEMGKSMRPIYTAALKDELVKPDK


General information:
TITO was launched using:
RESULT:

Template: 3NAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1165 for 252 contacts (-4.6/contact) +
2D Compatibility (PS) -7636 + (NN) -13791 + (LL) 2604
1D Compatibility (HY) 800 + (ID) 1100
Total energy: -20288.0 ( -80.51 by residue)
QMean score : 0.334

(partial model without unconserved sides chains):
PDB file : Tito_3NAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NAH-query.scw
PDB file : Tito_Scwrl_3NAH.pdb: